Resources

About Resources Plug-in

Resources (Lexical) is a plug-in for management and grouping some lexical resources in Biomedical Text Mining (BioTM) area. A resource can be defined as a list structured elements that can be used in BioTM processes. Some examples are dictionaries to identify entities in text (by pattern matching) or ontology for the classification of those entities.

In this package are included dictionaries, lookup tables, ontologies and syntactic rules.

User HowTOs

Dictionary Create Dictionary Management Content Dictionary Merge Dictionary Update LookupTable Add Element LookupTable Create LookupTable Export To CVS File LookupTable Import Element From CSV FIle LookupTable Merge Ontology Create Resources Plugin Management RulesSet Add Rule RulesSet Create RulesSet Merge

MVC AIBench Model:

Data-types:

Dictionaries: Represent a Dictionary Set.

DictionaryAibench: Represent a Dictionary.

LookupTables: Represent a Lookup Table Set.

LookupTableAibench: Represent a Lookup Table.

Ontologies: Represent an Ontology Set.

OntologyAibench: Represent an Ontology.

Resources: Contains information about all lexical resources presents in @Note2 and permit adding a new resource (Dictionary, lookup tables, rules or ontologies) to a system.

RulesSet: Represent Rules Set. Permit Rules Set creation.

RulesAibench: Represent a Rule Set a permits a creation of a new rule and changing rules priority.

Operations :

InitResources: Plug-in Starting

ExitResources: Exit Plug.in.

CreateDictionary: Create a new Dictionary.

MergeDictionary: Merging Dictionaries.

UploadDicionary: Import new elements and synonyms, from database flat file, for dictionaries.

UpdateDictionaryBiowareHouse: Import new elements and synonyms, from local BiowareHouse database, for dictionaries.

AddTermToLookupTable: Adding a new Element for Lookup Table.

CreateLookupTable: Create Lookup Table.

LoadLookupTableCSV: Import data, form .cvs file, to Lookup Table.

MergeLookupTable: Merging Lookup Tables.

SaveLookupTableCSV: Save LookupTable in csv file.

CreateOntology: Create a new Ontology.

CreateRulesSet: Create a new Rules Set.

MergeRuleSet: Merging Rule Set.

NewRule: Create a new Rule Set.

Views:

DictionariesView: Dictionaries View that show Dictionaries available and permits selection adding dictionary in clipboard.

DictionaryView: DictionaryAibench View that show dictionary information. This view permits dictionary elements management.

LookupTablesView: LookupTables View that show LookupTable available and permits selection adding LookupTable in clipboard.

LookupTableView: LookupTableAibench View that show LookupTable information.

RulesSetView: RulesSet View that show RuleSet available and permits selection adding RuleSet in clipboard.

RulesView: RulesAibench View that shows Rules information and permits priority changing.