Difference between revisions of "LookupTable Import Element From CSV FIle"

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(Example)
 
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== Configuration ==
 
== Configuration ==
  
A graphical interface is launched that allows the user to select the file / view information about first lines and select General Delimiter,Text Delimiter, DefaultValue and column for add terms and for term class.
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A graphical interface is launched that allows you to select the file / view information about the first lines and select General Delimiter,Text Delimiter, DefaultValue and column for adding terms and for term classes.
 +
 
  
 
[[File:Lookup_Table_Update_CSV.png|800px|center]]
 
[[File:Lookup_Table_Update_CSV.png|800px|center]]
 +
  
 
* General Delimiter: overall file delimiter to split the contents of different columns (in Blue)
 
* General Delimiter: overall file delimiter to split the contents of different columns (in Blue)
 
* Text Delimiter: delimiter to encapsulate information (in green)
 
* Text Delimiter: delimiter to encapsulate information (in green)
* Default Value: Default value used to represent empty records; ( in orange )
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* Default Value: default value used to represent empty records ( in orange )
* Column Selection Options: select the column for terms and for term class (In violet)
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* Column Selection Options: select the column in the file where terms and term classes are defined (In violet)
 +
 
  
 
[[File:Lookup_Table_Update_CSV_2.png|800px|center]]
 
[[File:Lookup_Table_Update_CSV_2.png|800px|center]]
 +
  
 
== Example ==
 
== Example ==
 +
 
Some examples :
 
Some examples :
  

Latest revision as of 11:46, 23 January 2014

Operation

The application allows a set of terms to be imported into a lookup table from a file in the CSV format. The format of this file is quite flexible allowing several different configurations (see definitions and examples below). For that purpose, right click in the lookup table object and select Load Lookup Table (CVS File) in the Lookup Table sub-menu: Resources - Lookup Table-> Load Lookup Table (CVS File).


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Configuration

A graphical interface is launched that allows you to select the file / view information about the first lines and select General Delimiter,Text Delimiter, DefaultValue and column for adding terms and for term classes.


Lookup Table Update CSV.png


  • General Delimiter: overall file delimiter to split the contents of different columns (in Blue)
  • Text Delimiter: delimiter to encapsulate information (in green)
  • Default Value: default value used to represent empty records ( in orange )
  • Column Selection Options: select the column in the file where terms and term classes are defined (In violet)


Lookup Table Update CSV 2.png


Example

Some examples :

Example

General delimiter: TAB ( \t )

text Delimiter: NONE


GRF1         Protein
GRF2         Protein
ATPA         Protein
CYPLXXVIII   Protein

Result

In the end of this operation you can view a resources update report