Pubmed Search

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Revision as of 09:12, 24 April 2013 by Hcosta (talk | contribs) (Find Document given PMIDs list)
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Operation

To perform PubMed searches, right click on an object of the Publication Manager data-type Publication Manager -> Search in the clipboard or press the New Query button on the Publication Manager View (bottom left).


PubMed Search.png


Search Settings

A new PubMed search will be performed using the keywords selected in the pop-up window.


Pubmed Search GUI.png


You can restrict the search for a specific organism and can also select the name of an author, a journal, the type of article, if the article is present in PubMed Central or Medline, if full text is available or select a publication date interval.

Confirm results

Pressing the Ok button' starts the search process and a pop-up window is launched allowing to check the number of results prior to the retrieval of the full results.


Pubmed Search GUI After.png


Result

If the query succeeds, the new Query results become available in the Publication Manager View as shown below.


PublicationManager GUI.png


While the query is processing, a progress bar presents the estimated time for the operation to conclude.


Estimate time left.png

Special Search Setting

This section is for special case searchs in Pubmed using Pubmed Search operation.

Find Document given PMIDs list

Example: 

'''PMID:'''
19210448
19789687
18730734
20385001
'''keywords''' = 19210448[uid] OR 19789687[uid] OR 18730734[uid] OR 20385001[uid]
PubmedSearchByPmids.png