Difference between revisions of "Machine Learning biotml"

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(User HowTOs)
(User HowTOs)
 
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[[Corpus_Create_Annotation_Schema_By_BioTML_Tagger | NER Annotation of documents using machine learning models]]
 
[[Corpus_Create_Annotation_Schema_By_BioTML_Tagger | NER Annotation of documents using machine learning models]]
  
[[Corpus_Relation_Extraction_By_BioTML_Tagger | | RE Annotation of documents using machine learning models]]
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[[Corpus_Relation_Extraction_By_BioTML_Tagger | RE Annotation of documents using machine learning models]]
  
 
== MVC AIBench Model: ==
 
== MVC AIBench Model: ==

Latest revision as of 14:15, 4 August 2015

About BioTML Plug-in

BioTML is a Machine learning based plug-in that enables users to create models, trained based on available annotations (NER or RE) created by the user using the manual curation environment. These models can be used in a prediction stage to annotate documents from a selected @Note corpus.

Install Plug-in

The BioTML can be installed as any other plugin following the instructions available in:

How to Install

User HowTOs

NER Model Creation

RE Model Creation

NER Annotation of documents using machine learning models

RE Annotation of documents using machine learning models

MVC AIBench Model:

Operations:

CreateNERModelFile: Creates a BioTML NER model file using an existent NERProcess for novel entity identification in other corpus.

CreateREModelFile: Creates a BioTML RE model file using an existent REProcess for novel relations identification in other corpus.

AnnotateCorpusWithNERModel: Apply the NER Process to Corpus based in the provided machine learning model prediction for entity identification.

AnnotateCorpusWithREModel: Apply the RE Process to Corpus based in the provided machine learning model prediction associated with an existent NERProcess for entity identification.