Machine Learning biotml
About BioTML Plug-in
BioTML is a Machine learning based plug-in that enables users to create models, trained based on available annotations (NER or RE) created by the user using the manual curation environment. These models can be used in a prediction stage to annotate documents from a selected @Note corpus.
The BioTML can be installed as any other plugin following the instructions available in:
MVC AIBench Model:
CreateNERModelFile: Creates a BioTML NER model file using an existent NERProcess for novel entity identification in other corpus.
CreateREModelFile: Creates a BioTML RE model file using an existent REProcess for novel relations identification in other corpus.
AnnotateCorpusWithNERModel: Apply the NER Process to Corpus based in the provided machine learning model prediction for entity identification.
AnnotateCorpusWithREModel: Apply the RE Process to Corpus based in the provided machine learning model prediction associated with an existent NERProcess for entity identification.