Difference between revisions of "LookupTable Import Element From CSV FIle"
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[[Category:HOWTOs]] | [[Category:HOWTOs]] | ||
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− | Resources - | + | The user can import information from a CSV file (see examples below) to adding term to Lookup Table. For that user must press the '''right mouse button''' in dictionary data-type and select '''Update From CSV File''' option in Lookup Table sub-menu. '''Resources - Lookup Table-> Update From CSV File''' |
− | [[File: | + | [[File:Lookup_Table_Update_CSV_1.png|1500px|boarder|center]] |
+ | Appears a graphical interface that allows the user to select the CSV file and option. | ||
− | The .csv file | + | [[File:Lookup_Table_Update_CSV_2.png|800px|center]] |
+ | |||
+ | Basic Options: | ||
+ | |||
+ | * File: pressing the File button the user can browse and select csv file on your computer. | ||
+ | * General Delimiter: The overall file delimiter to separate the contents of columns | ||
+ | * Text Delimiter: The delimiter to encapsulate information | ||
+ | * ExternalID Delimiter: The delimiter for separate ExternalId present in a column. | ||
+ | * ExternalID Source Delimiter: The delimiter for separate ExternalID and Source. | ||
+ | |||
+ | Beyond these parameters there are other advanced options. To access advance option the user must press ''Advance Options'' and will appear in graphical interface a new panel with advanced options. | ||
+ | |||
+ | [[File:Dictionary_Update_CSV_3.png|800px|center]] | ||
+ | Advanced Options: | ||
+ | * Default Value: Default value for empty value; | ||
+ | * Column Options: Select the column indices in which appears interest terms (term, class and external IDs) | ||
+ | |||
+ | The .csv file examples : | ||
+ | |||
+ | '''Example ''' | ||
+ | |||
+ | ''General delimiter:'' TAB ( \t ) | ||
+ | |||
+ | ''text Delimiter:'' NONE | ||
+ | |||
+ | ''ExternalID Delimiter:'' Vertical Bar (|) | ||
+ | |||
+ | ''ExternalID Source Delimiter: WHITE SPACE (;) | ||
<pre> | <pre> | ||
− | + | ||
− | + | GRF1 Protein KEGG;zma:542291|P49106;IntAct | |
− | + | GRF2 Protein Q01526;SMR | |
+ | ATPA Protein - | ||
+ | CYPLXXVIII Protein - | ||
+ | |||
</pre> | </pre> |
Revision as of 18:36, 20 June 2012
The user can import information from a CSV file (see examples below) to adding term to Lookup Table. For that user must press the right mouse button in dictionary data-type and select Update From CSV File option in Lookup Table sub-menu. Resources - Lookup Table-> Update From CSV File
Appears a graphical interface that allows the user to select the CSV file and option.
Basic Options:
- File: pressing the File button the user can browse and select csv file on your computer.
- General Delimiter: The overall file delimiter to separate the contents of columns
- Text Delimiter: The delimiter to encapsulate information
- ExternalID Delimiter: The delimiter for separate ExternalId present in a column.
- ExternalID Source Delimiter: The delimiter for separate ExternalID and Source.
Beyond these parameters there are other advanced options. To access advance option the user must press Advance Options and will appear in graphical interface a new panel with advanced options.
Advanced Options:
- Default Value: Default value for empty value;
- Column Options: Select the column indices in which appears interest terms (term, class and external IDs)
The .csv file examples :
Example
General delimiter: TAB ( \t )
text Delimiter: NONE
ExternalID Delimiter: Vertical Bar (|)
ExternalID Source Delimiter: WHITE SPACE (;)
GRF1 Protein KEGG;zma:542291|P49106;IntAct GRF2 Protein Q01526;SMR ATPA Protein - CYPLXXVIII Protein -