Difference between revisions of "What´s new"

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Short list of what's new in @ Note2
 
Short list of what's new in @ Note2
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Summary of features - Anote2 vs Anote
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General:
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• Eliminates dependency on Perl; fully implemented in Java; easier to install and run in different platforms
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• MySql database used to store all relevant information (including annotations); data model extended and re-organized to provide the core of the application
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• Organization in a set of plug-ins taking advantage of AI Bench plug-in system; improves modularity; makes easier adding new functionality and alternatives for different processes
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• Code was re-organized using Java interfaces for all relevant concepts and processes, making easier the integration of third party applications; MVC notions from AI Bench are better used to provide organized GUIs; core plug-ins define basic data structures and the interface of basic processes
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• Indication of progress in time consuming processes
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PubMedSearch
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• Now a plug-in; new implementation more efficient based on eUtils.
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• Query management system; larger number of options available
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• Possibility of including external publications
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• Possibility of updating the results of queries
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• System to avoid publication crawling
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Resources
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• Better management of lexical resources (dictionaries, lookup tables, etc)
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• Introduction of rules and ontologies
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• More loaders and an interface allowing the easy implementation of new loaders
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Corpus / corpora
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• Notion of corpus/ corpora added to @Note in a new plug-in
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• Allows creating corpus from the publication manager
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• Information extraction processes are-organized over corpora
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• Corpus loader: Allows creating corpus from other available corpora (Genia Events, AIMED Protein and @NoteV1).
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NER Resources
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• Developed fully in Java and adapted to the new resources
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• External NERs can be added with an easier interface
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Curator
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• Organized in a new plug-in
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• Uses only HTML
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Relation
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• New Plug-in for Relation Extraction based in Natural Language processing
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• Supports RE over corpora annotated by any NER

Revision as of 10:29, 28 March 2012

Short list of what's new in @ Note2

Summary of features - Anote2 vs Anote

General: • Eliminates dependency on Perl; fully implemented in Java; easier to install and run in different platforms • MySql database used to store all relevant information (including annotations); data model extended and re-organized to provide the core of the application • Organization in a set of plug-ins taking advantage of AI Bench plug-in system; improves modularity; makes easier adding new functionality and alternatives for different processes • Code was re-organized using Java interfaces for all relevant concepts and processes, making easier the integration of third party applications; MVC notions from AI Bench are better used to provide organized GUIs; core plug-ins define basic data structures and the interface of basic processes • Indication of progress in time consuming processes

PubMedSearch • Now a plug-in; new implementation more efficient based on eUtils. • Query management system; larger number of options available • Possibility of including external publications • Possibility of updating the results of queries • System to avoid publication crawling

Resources • Better management of lexical resources (dictionaries, lookup tables, etc) • Introduction of rules and ontologies • More loaders and an interface allowing the easy implementation of new loaders

Corpus / corpora • Notion of corpus/ corpora added to @Note in a new plug-in • Allows creating corpus from the publication manager • Information extraction processes are-organized over corpora • Corpus loader: Allows creating corpus from other available corpora (Genia Events, AIMED Protein and @NoteV1).

NER Resources • Developed fully in Java and adapted to the new resources • External NERs can be added with an easier interface

Curator • Organized in a new plug-in • Uses only HTML


Relation • New Plug-in for Relation Extraction based in Natural Language processing • Supports RE over corpora annotated by any NER