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| − | __TOC__
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| − | == About Publication Manager Plug-in ==
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| − | This plugin was developed in collaboration with the SING group at University of Vigo - Spain.
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| − | Information Retrieval plug-in divided and two main points:
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| − | * Publication searching in PubMed, with the combination of keywords and specific fields. The result is a set of publication what contains information about title, abstract, journal. These publications are organized in queries
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| − | * Publication Retrieval that try get PDF file for a Publication indexed for PMID.There are limitation for crawling article (free access only).
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| − | For structuring this plug-in was defined Queries, a publication Set. This publications can be classified in a Query ( Publication Query Relevance ). This step can be important for example in corpus creation or in learning data for automatic classification systems.
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| − | == User HowTOs ==
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| − | == MVC AIBench Model: ==
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| − | === '''''Data-types:''''' ===
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| − | '''''PublicationManager''''': Plug-in Main Data-type that contains information about all PubMed search already done. Contain information about proxy and database given by configuration file and directory for publications PDF files.
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| − | '''''QueryInformationRetrievalExtension''''': Represent a Query. Contain information about database ID, date, keywords, organism, matching publications, available abstracts and other generic query properties.
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| − | === '''''Operations:''''' ===
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| − | '''''AddFileToPublicationManagerOperation''''': Manually add a PDFfile for publication.
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| − | '''''AddPublicationToQueryOperation''''': Add a new publication to QueryInformationRetrievalExtension.
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| − | '''''ExitOperation''''': Publication Manager exit operation.
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| − | '''''InitReferenceManager''''': Initialize PublicationManager plug-in.
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| − | '''''JournalRetrivalListDocs''''': Operation that given a list PMID try gets PDF files.
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| − | '''''PubmedSearchOperation''''': Operation for Search in PubMed given the query details.
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| − | '''''SelectRelevance''''': Change document relevance for query.
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| − | '''''UpdateQueryOperation''''': Update QueryInformationRetrievalExtension (updates the result of PubMed search in time).
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| − | === '''''Views:''''' ===
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| − | '''''PublicationManagerView''''': PublicationManager View that contains a visualizer off all queries presents in Publication Manager and permits have some filters.
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| − | '''''QueryRelevanceView''''': QueryInformationRetrievalExtension View that permits viewing documents in a query whit your relevance.
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| − | '''''QueryView''''': QueryInformationRetrievalExtension View that permits viewing documents in a query an permits some search steps.
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